Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015848795.1_cds_XP_016510537.1_23364
CDS Infomation

[gene=LOC107827839] [db_xref=GeneID:107827839] [protein=calcium-dependent protein kinase 1-like] [protein_id=XP_016510537.1] [location=complement(join(5739..5864,6408..6632,7798..7965,8060..8175,8433..8585,8769..8912,9283..10096))] [gbkey=CDS]
Sequence

ATGGGGAACACTTGTGTTGGACCAAGTATTTCTAAAAATGGTCTTTTTCAGTCAGTTTCA
GCTGCAATGTGGCGAACTCGGGCGCCAGATGATTCTGGTTCCACCACTAATGGTGATAGT
GCCAGAGGTGAAACAACAGAATCCGGAAAAGACCCTGATTTGGTTGTCCAAAATAAGCCA
CCAGAACAGATAACAATGCCTAAGTCTGAGCAAAAGGAAGAGGAGCCGGCGAAAAAGGAA
GAGGGACCGGTAAAGCCTAAGAAGCCGGTAGAGATGAAGAGGGTAGGTAGTGCAGGCCTT
AGGACTGATTCTGTATTACAGAAGAAAACTGGCAACTTAAAGGAGTTTTTCAGTATAGGA
AAGAAATTAGGACAAGGACAATTCGGAACTACGTTTAAATGTGTCGAAAAGGCAACAGGG
AAGGAGTACGCTTGCAAATCGATTGCTAAGAGGAAGTTGTTGACAGATGATGATGTGGAA
GATGTTAGAAGGGAAGTTCAGATAATGCACCACTTGGCGGGGCATCCAAATGTTATATCG
ATAAAAGGGGCTTATGAGGATGCTGTAGCTGTTCATGTCGTTATGGAATATTGTGCTGGA
GGTGAGCTTTTCGATAGGATTATTCAGCGGGGGCACTATACTGAAAGAAAAGCGGCTGAG
CTCACCAGGACTATTGTTGGAGTTCTAGAAACTTGTCATTCTCTGGGCGTCATGCATCGT
GATCTTAAGCCTGAAAATTTTCTTTTTGTTAATCAGAAGGAGGATTCACTACTCAAAACA
ATTGACTTTGGATTGTCAATTTTCTTCAAACCAGGTGACAGATTTAATGATGTTGTTGGC
AGTCCTTACTATGTTGCACCAGAAGTTCTCAAAAAACGCTATGGTCCCGAAGCTGATGTT
TGGAGTGCTGGTGTGATTGTGTACATTTTATTAAGTGGAGTACCTCCTTTCTGGGCTGAA
AATGAGCAAGGAATATTCGAAGAAGTCCTACATGGTGATCTCGACTTCTCATCAGATCCA
TGGCCTAGTATTTCAGAAGATGCAAAAGACTTAGTCAGGAGAATGCTTGTTCGAGATCCC
AAAAAACGTTTAACTGCTCATGAAGTCTTGTGCCATCGTTGGGTTCAAGTTGATGGTGTG
GCACCAGATAAGCCTCTGGATTCTGCAGTTCTGAGTCGAATGAAACAATTTTCTGCAATG
AACAAGCTCAAGAAAATGGCTTTGAGAGTCATCGCCGAAAGCCTATCTGAAGAAGAAATT
GCTGGTCTGAAAGAAATGTTCAGGATGATAGATACAGACAATAGTGGTCAAATAACCTTT
GAGGAGCTCAAAGTTGGATTAAAAAGAGTTGGCGCTAATCTCAAGGAGTCCGAGATCTAT
GATCTTATGCAGGCAGCAGATGTTGATAACAGCGGCACAATTGATTATGGGGAATTTATA
GCTGCAACATTACATTTTAACAAAATTGAAAGAGAAGATCATCTATTTGCTGCTTTCTCT
TACTTTGATAAAGATGGCAGTGGCTACATTACCGCAGACGAGCTTCAACAAGCTTGTGAG
GAATTTGGTATTGGGGATGTCCATCTAGAAGATATGATAAGAGACGCTGATCAGGACAAT
GATGGACGAATTGATTACAATGAGTTCGTTGCTATGATGCAAAAGGGAAACCCGGTGATT
GGTGGGGGCAAGAAAGGTCTAGAACACAGTTTCAGCACCGGATTTAGAGAGGCTCTAAGA
CTTTAG

Peptide Sequence

PEP ID

XP_016510537.1
PEP Infomation

PREDICTED: calcium-dependent protein kinase 1-like [Nicotiana tabacum]
Sequence

MGNTCVGPSISKNGLFQSVSAAMWRTRAPDDSGSTTNGDSARGETTESGKDPDLVVQNKP
PEQITMPKSEQKEEEPAKKEEGPVKPKKPVEMKRVGSAGLRTDSVLQKKTGNLKEFFSIG
KKLGQGQFGTTFKCVEKATGKEYACKSIAKRKLLTDDDVEDVRREVQIMHHLAGHPNVIS
IKGAYEDAVAVHVVMEYCAGGELFDRIIQRGHYTERKAAELTRTIVGVLETCHSLGVMHR
DLKPENFLFVNQKEDSLLKTIDFGLSIFFKPGDRFNDVVGSPYYVAPEVLKKRYGPEADV
WSAGVIVYILLSGVPPFWAENEQGIFEEVLHGDLDFSSDPWPSISEDAKDLVRRMLVRDP
KKRLTAHEVLCHRWVQVDGVAPDKPLDSAVLSRMKQFSAMNKLKKMALRVIAESLSEEEI
AGLKEMFRMIDTDNSGQITFEELKVGLKRVGANLKESEIYDLMQAADVDNSGTIDYGEFI
AATLHFNKIEREDHLFAAFSYFDKDGSGYITADELQQACEEFGIGDVHLEDMIRDADQDN
DGRIDYNEFVAMMQKGNPVIGGGKKGLEHSFSTGFREALRL

Transcript Sequence

Gene sequence data has not been registered.